PlotTree: PlotTree
In mana-W/LinTInd: Lineage tracing by indels

Description Usage Arguments Details Value Examples

Function to visualise the array generate tree

1	PlotTree(treeinfo, data.extract = NULL, annotation = NULL, prefix = NULL)

`treeinfo`	List generate from BuildTree, for more see `BuildTree`
`data.extract`	(optional) If "FALSE" (default), will not return the indel's information, if it's "TRUE", the opposite
`annotation`	(optional) If "TRUE" (default), the annotation of each cell barcodes have to be provided before, and a heatmap of cells' distribution for each array will be return
`prefix`	(optional) Indels' prefix

Title

A list include a ggplot object, a dataframe show the distribution of each array contained in each group of cells (optional), and a dataframe to create the ggplot object

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data("example_data",package = "LinTInd")
plotinfo<-PlotTree(treeinfo = treeinfo,data.extract = "TRUE",annotation = "TRUE")
plotinfo<-PlotTree(treeinfo = treeinfo,data.extract = "TRUE",annotation = "FALSE")