rangemap_plot: Plot of sp_range* objects

In manubio13/rangemap: Simple Tools for Defining Species Ranges

Plot of sp_range* objects

Description

rangemap_plot generates customizable figures of species range maps using objects produced by other functions of this package.

Usage

rangemap_plot(sp_range, polygons, add_EOO = FALSE, add_occurrences = FALSE,
              basemap_color = "gray93", range_color = "darkgreen",
              extent_color = "blue", occurrences_color = "yellow",
              grid = FALSE, grid_sides = "bottomleft", ylabels_position = 1.3,
              legend = FALSE, legend_position = "bottomright",
              northarrow = FALSE, northarrow_position = "topright",
              scalebar = FALSE, scalebar_position = "bottomleft",
              scalebar_length = 100, zoom = 1)

Arguments

sp_range	a sp_range object produced with any of the following functions: rangemap_buffer, rangemap_boundaries, rangemap_hull, rangemap_enm, and rangemap_tsa.
polygons	(optional) a SpatialPolygons* object to be used as base for the map. If NULL, a simplified world map will be used.
add_EOO	(logical) if TRUE, the extent of occurrence of the species will be added to the figure. Ignored if the sp_range is product of the rangemap_boundaries function and administrative areas were selected only based on names. Default = FALSE.
add_occurrences	(logical) if TRUE, the species occurrence records will be added to the figure. Ignored if the sp_range is product of the rangemap_boundaries function and administrative areas were selected only based on names. Default = FALSE.
basemap_color	color for the basemap (polygons) to be plotted. Default = "gray93".
range_color	color for the species sp_range to be plotted. Default = "darkgreen".
extent_color	color for the species extent of occurrence to be plotted. Default = "blue".
occurrences_color	color for the species occurrences to be plotted. Default = "yellow".
grid	(logical) if TRUE, labels and grid division ticks will be inserted in grid_sides. Default = FALSE.
grid_sides	(character) sides in which the labels will be placed in the figure. Options are the same than for other position character indicators (see details). Default = "bottomleft".
ylabels_position	(numeric) if grid = TRUE, separation (in lines) of y axis labels from the axis. Bigger numbers will increase separation. Default = 1.3.
legend	(logical) if TRUE, a legend of the plotted features will be added to the figure at legend_position. Default = FALSE.
legend_position	(numeric or character) site in the figure where the legend will be placed. If numeric, vector of length two indicating x and y coordinates to be used to position the legend. See details for options of character indicators of position. Default = "bottomright".
northarrow	(logical) if TRUE, a simple north arrow will be placed in northarrow_position. Default = FALSE.
northarrow_position	(numeric or character) site in the figure where the north legend will be placed. If numeric, vector of length two indicating x and y coordinates to be used to position the north arrow. See details for options of character indicators of position. Default = "topright".
scalebar	(logical) if TRUE, a simple scale bar will be inserted in the figure at scalebar_position with a length of scalebar_length. Default = FALSE.
scalebar_position	(numeric or character) site in the figure where the scale bar will be placed. If numeric, vector of length two indicating x and y coordinates to be used to position the scale bar. See details for options of character indicators of position. Default = "bottomleft".
scalebar_length	(numeric) length of the scale bar in km. Using entire numbers divisible for two is recommended. Default = 100.
zoom	(numeric) zoom factor when plotting the species range in a map. Default = 1. Larger values will zoom in into the species range and smaller values will zoom out. A value of 0.5 will duplicate the area that the biggest range is covering.

Details

Position of distinct elements depend on the spatial configuration of the species range. Therefore, their position may need to be changed if the elements are needed. Position options are: "bottomright", "bottomleft", "topleft", and "topright". Numerical descriptions of positions are also allowed.

Value

A plot of the species range in a geographic context, with some map components defined by the user.

Examples

# example data
data("cvehull_range", package = "rangemap")

# arguments for the species range figure
extent <- TRUE
occ <- TRUE
legend <- TRUE

# creating the species range figure
rangemap_plot(cvehull_range, add_EOO = extent, add_occurrences = occ,
              legend = legend)

manubio13/rangemap documentation built on May 9, 2022, 6:27 a.m.