slices_plot: Select active areas within a mask
In marcopalma3/neurofundata: Functional data analysis tools for neuroimaging data

Description Usage Arguments Author(s)

View source: R/slices_plot.R

Select the part of the image within the mask.

slices_plot(
  image_vec,
  mask_obj = mask,
  dims = dims_mask,
  img_templ = img_template,
  voxels,
  col_threshold = 0,
  legend_range = range(image_vec),
  slice_number = FALSE,
  ...
)

`image_vec`	vectorised image values
`mask_obj`	original mask image
`dims`	image dimensions
`img_templ`	minimal deformation template (for TBM images)
`voxels`	voxels indices within the mask (it must have the same dimensions as image_vec)
`col_threshold`	midpoint in the divergent colour scale
`legend_range`	extremes of the divergent colour scale
`slice_number`	add a note about the slices number in the array