combineResults: Combine results

In marcusrosenblatt/RNAsense: Analysis of Time-Resolved RNA-Seq Data

Description

Results of switch and fold change analysis are collected in one data.frame

Usage

combineResults(myresultSwitch = resultSwitch, myresultFC = resultFC,
  nrcores = 1)

Arguments

myresultSwitch	data.frame, output of getSwitch
myresultFC	data.frame, output of getFC
nrcores	Numeric, Number of cores for parallelization, default 1 for no parallelization

Value

Data.frame containing information on switch and fold change detection for each gene

Author(s)

Marcus Rosenblatt, [e-mail]

Examples

data(MZsox)
mydata <- MZsox[seq(1,nrow(MZsox), by=20),]
resultFC <- getFC(dataset = mydata,
myanalyzeConditions = c("WT", "MZsox"),
cores = 1,
mytimes = c(2.5,3,3.5,4,4.5,5,5.5,6))
resultSwitch <- getSwitch(dataset = mydata,
experimentStepDetection = "WT",
cores = 1,
mytimes = c(2.5,3,3.5,4,4.5,5,5.5,6))
combineResults(resultSwitch, resultFC)

marcusrosenblatt/RNAsense documentation built on Dec. 7, 2020, 5:26 p.m.