Description Usage Arguments Value
Based on method and code from Johann Gagnon-Bartsch. This function is written by Johann Gagnon-Bartsch and will become part of the ruv package.
1 2 |
Y |
The matrix of values to be normalized |
M |
A amtrix that describes the organization of the replicates in the Y matrix |
ctl |
An integer vector denoted which columns in the Y matrix are controls |
k |
The number of factors to remove |
average |
Logical to determine if averages should be returned |
fullalpha |
A list with the normalized Y values and the fullalpha matrix
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