preprocessCommonSignalsLevel3: Normalize the common signals across studies
In markdane/MEMA: Functions to preprocess and normalize MEMA data
Description
Usage
Arguments
Value
Description
Normalize the common signals across studies
Usage
1
preprocessCommonSignalsLevel3(paths, k = 256L, verbose = FALSE)
Arguments
paths
A list of paths to level 2 data, each element is a different study.
k
The number of factors to use in the RUV normalization
verbose
A logical for progress messages
Value
A datatable of raw and normalized spot level data with its metadata
markdane/MEMA documentation built on May 21, 2019, 11:48 a.m.
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Description Usage Arguments Value
Description
Normalize the common signals across studies
Usage
1 | preprocessCommonSignalsLevel3(paths, k = 256L, verbose = FALSE)
|
Arguments
paths |
A list of paths to level 2 data, each element is a different study. |
k |
The number of factors to use in the RUV normalization |
verbose |
A logical for progress messages |
Value
A datatable of raw and normalized spot level data with its metadata
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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