show: Display object summary

In markdunning/beadarray: Quality assessment and low-level analysis for Illumina BeadArray data

Description

Prints a summary of an objects contents.

Usage

## S4 method for signature 'beadLevelData'
show(object)

## S4 method for signature 'ExpressionSetIllumina'
show(object)

Arguments

object

An object of class beadLevelData or ExpressionSetIllumina

Details

show is commonly invoked by simply entering the name of an object. Calling it on the classes defined in beadarray will print a summary of the object contents, with the actual output dependent on the class of the object.

Output for the beadLevelData class is broken down into three sections: experiment information, data that relate to each array section and data for individual beads. The full information relating to the first two groups will be display, with only a short summary of the per-bead information shown (currently 5 beads from the first section).

The ExpressionSetIllumina class is based up the eSet class and the output from show is closely related, with a short summary of the contents of available slots.

Author(s)

Mark Dunning

markdunning/beadarray documentation built on May 9, 2019, 8:35 a.m.