enrichmentTable: Export bootstrap enrichment analysis

In martijnmolenaar/bmetenrichr: metabolite set enrichment analysis with bootstrapping

Export bootstrap enrichment analysis

Description

Export bootstrap enrichment analysis

Usage

enrichmentTable(object, ...)

Arguments

object	A bmetenrichr object after enrichment analysis.
min.annotations	An integer describing the minimal number of annotations each term should include (default = 2).
q.value.cutoff	A numeric between 0 and 1. Only terms with q-values lower than this value will be displayed (default = 0.5).
bootstrap.fraction.cutoff	A numeric between 0 and 1 (default = 0.5), indicating the minimal fraction that the metabolite set is present in all bootstrap iterations.

Value

A data.frame

Examples

enrichmentTable(myTestRun)

martijnmolenaar/bmetenrichr documentation built on Aug. 16, 2024, 12:20 a.m.