nTopVar: nTopVar
In martinenge/RNAseqFunctions: RNA sequencing functions for the Enge lab
Description
Usage
Arguments
Details
Value
Author(s)
Description
Facilitates gene selection using variance.
Usage
1
Arguments
cpm
matrix; Matrix containing cpm values.
n
Number of genes to select.
safe
logical; Should input and output checks be on?
Details
Returns the index for the n genes (rows) with the maximum
variance in the counts object. Counts per million (CPM) should be used for
the calculation.
Value
A numeric vector containing the indices of selected genes.
Author(s)
Jason T. Serviss
martinenge/RNAseqFunctions documentation built on May 28, 2019, 3:10 p.m.
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Description Usage Arguments Details Value Author(s)
Description
Facilitates gene selection using variance.
Usage
1 |
Arguments
cpm |
matrix; Matrix containing cpm values. |
n |
Number of genes to select. |
safe |
logical; Should input and output checks be on? |
Details
Returns the index for the n genes (rows) with the maximum variance in the counts object. Counts per million (CPM) should be used for the calculation.
Value
A numeric vector containing the indices of selected genes.
Author(s)
Jason T. Serviss
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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