plotTsne: plotTsne

Description Usage Arguments Author(s)

Description

Plots tsne.

Usage

1
plotTsne(tsne, counts.log, markers = NULL, pal = col40())

Arguments

tsne

matrix; Output from runTsne function.

counts.log

matrix; Matrix of log2 counts per million with samples as columns and genes as rows.

markers

character; The markers to evaluate. Must be present in rownames(counts.cpm).

pal

character; A colour palette with length >= length(markers).

...

additional arguments to pass on.

Author(s)

Jason T. Serviss


martinenge/RNAseqFunctions documentation built on May 28, 2019, 3:10 p.m.