Files in mathedjoe/animaltracker
Animal Tracker
.Rbuildignore
.gitignore
DESCRIPTION
MC_2020.rds
NAMESPACE
NEWS.md
R/.Rhistory
R/app.R
R/app_server.R
R/app_ui.R
R/data.R
R/data_analysis.R
R/data_cleaning.R
R/data_processing.R
R/data_storage.R
R/inputs_module.R
R/plots_module.R
R/scratch/Riggs_March19_79.csv
R/scratch/accel/DATA-002.CSV
R/scratch/accel/accel_data_wrangling_experimental.R
R/scratch/accel/parse_accel.R
R/scratch/accel/rf_2018/Cow 12 All Observation Data.xlsx
R/scratch/accel/rf_2018/Cow 7 Example Test File.xlsx
R/scratch/accel/rf_2018/November 2017 Observed Data All Cows (1).xlsx
R/scratch/accel/rf_2018/RF_model_Cow_11.r
R/scratch/accel/rf_2018/bulk_processing_accel_data.R
R/scratch/accel/supervised/cow_accel.rda
R/scratch/accel/supervised/gboost_all_train.rda
R/scratch/accel/supervised/gboost_all_train2.rda
R/scratch/accel/supervised/gboost_all_train3.rda
R/scratch/accel/supervised/gboost_sprinkle_train.rda
R/scratch/accel/supervised/gboost_sprinkle_train2.rda
R/scratch/accel/supervised/model_gboost.R
R/scratch/accel/supervised/model_rf_parsy.rda
R/scratch/accel/supervised/model_two_stage_logistic.R
R/scratch/accel/supervised/supervised_ML_accelonly_experimental.R
R/scratch/accel/supervised/viz_rf_fit.R
R/scratch/accel/supervised_model_comparison.Rmd
R/scratch/accel/supervised_model_comparison.html
R/scratch/accel/supervised_model_comparison.pdf
R/scratch/accel/unsupervised/gmm_fit_cow_accel.R
R/scratch/autoencoder_test.R
R/scratch/bayes_estimate_speed.R
R/scratch/custom_elevation_lookup.R
R/scratch/database/demo_ani_data.sqlite
R/scratch/database/r_sqlite_db_scratch.R
R/scratch/demo_animation.gif
R/scratch/demo_animation.mov
R/scratch/geom_bag.R
R/scratch/geom_bag_play.R
R/scratch/kmz_import.R
R/scratch/ml_test.R
R/scratch/ml_test2.R
R/scratch/movevis_demo.R
R/scratch/test_animation.gif
R/scratch/ts_clean/animate_spatialplot.gif
R/scratch/ts_clean/cluster_analysis_DW.pdf
R/scratch/ts_clean/cluster_analysis_DW_MC.pdf
R/scratch/ts_clean/time_series_clean.R
R/scratch/water.R
R/scratch/weather/experimental_integrate_weather.R
R/scratch/weather/sample_GPS_by_Temp_time.png
R/stats_module.R
R/validation_app.R
README.md
analysis/candidate.csv
analysis/correct.csv
analysis/data_compare_arizona.Rmd
analysis/df_candidate.csv
analysis/df_correct.csv
analysis/nm_comparison.Rmd
analysis/nm_comparison.html
analysis/nm_comparison_v2.Rmd
analysis/nm_comparison_v2.pdf
analysis/nm_validation.R
animaltracker.Rproj
animaltracker.pdf
data/datalist
data/demo.rda
data/demo_comparison.rda
data/demo_filtered.rda
data/demo_filtered_elev.rda
data/demo_info.rda
data/demo_meta.rda
data/demo_unfiltered.rda
data/demo_unfiltered_elev.rda
inst/extdata/demo_columbus.TXT
inst/extdata/demo_nov19.rds
inst/extdata/demo_nov19.zip
inst/extdata/demo_nov19/Bannock_2017_101_1149.csv
inst/extdata/demo_nov19/Bannock_2017_102_2253.csv
inst/extdata/demo_nov19/Bannock_2017_103_8855.csv
inst/extdata/demo_nov19/Bannock_2017_104_9964.csv
inst/extdata/demo_nov19/Riverside_SaddleButte_2018_102_cowxxxx.csv
inst/extdata/demo_nov19/Riverside_SaddleButte_2018_103_cowxxxx.csv
man/boxplot_altitude.Rd
man/boxplot_time_unit.Rd
man/clean_export_files.Rd
man/clean_location_data.Rd
man/compare_flags.Rd
man/compare_summarise_daily.Rd
man/compare_summarise_data.Rd
man/demo.Rd
man/demo_comparison.Rd
man/demo_filtered.Rd
man/demo_filtered_elev.Rd
man/demo_info.Rd
man/demo_meta.Rd
man/demo_unfiltered.Rd
man/demo_unfiltered_elev.Rd
man/detect_peak_modz.Rd
man/dev_add_to_gitignore.Rd
man/dist_points_to_water.Rd
man/get_file_meta.Rd
man/histogram_animal_elevation.Rd
man/histogram_time.Rd
man/histogram_time_unit.Rd
man/join_summaries.Rd
man/kmz_to_sf.Rd
man/line_compare.Rd
man/lookup_elevation_aws.Rd
man/lookup_elevation_file.Rd
man/process_elevation.Rd
man/qqplot_time.Rd
man/quantile_time.Rd
man/read_columbus.Rd
man/read_zip_to_rasters.Rd
man/run_shiny_animaltracker.Rd
man/run_validation_app.Rd
man/summarise_anidf.Rd
man/summarise_col.Rd
man/summarise_unit.Rd
man/violin_compare.Rd
temp.rds
test_data/2dtype_test.zip
test_data/Arizona_Data.zip
test_data/DeepWell_2018_Collar_Raw.zip
test_data/arizona_tocompare.zip
test_data/columbus_gps/30192350.TXT
test_data/columbus_gps/parse_columbus_gps.R
test_data/columbus_gps/sample_processed_data.csv
test_data/columbus_only.zip
test_data/demo.zip
test_data/nested_folder_test.zip
test_data/processed/P3_brennan.rds
test_data/processed/export_P3_brennan_2019_01_27.csv
test_data/processed/test_rawdata.rds
test_data/processed/three_fingers_2datasets.rds
test_data/raw/30192350.TXT
test_data/raw/P3_S129_2017.csv
test_data/raw/cow_final.xlsx
test_data/raw/dirty_sample_data.csv
test_data/raw/sample_location_data.csv
test_data/small_zip_test.zip
test_data/test_unknown/01.csv
test_data/test_unknown/02.csv
test_data/test_unknown/03.csv
