Examples/BCRAnalyses/RunPartisAnnotations.R

In matsengrp/sumrep: Summary statistics for B cell receptor (BCR) repertoires

source("Examples/RunAnnotations.R")

writeAnnotations("~/Data/FV-igh-m1h.fa", 
                 "p_f1",
                 "partis")
writeAnnotations("~/Data/FV-igh-m8d.fa", 
                 "p_f2",
                 "partis")
writeAnnotations("~/Data/GMC-igh-m1h.fa", 
                  "p_g1",
                 "partis")
writeAnnotations("~/Data/GMC-igh-m8d.fa", 
                 "p_g2",
                 "partis")
writeAnnotations("~/Data/IB-igh-m1h.fa", 
                 "p_i1",
                 "partis")
writeAnnotations("~/Data/IB-igh-m8d.fa", 
                 "p_i2",
                 "partis")