ReadInFaimsDirectoriesAutosampler: Read FAIMS data generated using an autosampler

In mattdneal/FAIMSToolkit: Tools to aid in the analysis of FAIMS data

Description

Read FAIMS data generated using an autosampler

Usage

ReadInFaimsDirectoriesAutosampler(dataPath, numRuns,
  filePattern = ".*[.](txt|asc)", runNumPattern = "[0-9]+[.](txt|asc)",
  dec = ".", minFlowRate = 1.9, dirPattern = ".*")

Arguments

dataPath	The directory to scan for data
numRuns	The number of runs to take
filePattern	a regex which should match the names of the files you want to ingest
runNumPattern	a regex which should match the run number of your data. Any characters found will be stripped and the result converted using as.numeric
dec	Decimal symbol
minFlowRate	minimum acceptable flow rate. If min flow rate falls below this threshold an error is thrown

Value

A FAIMS object

mattdneal/FAIMSToolkit documentation built on May 21, 2019, 12:57 p.m.