Description Usage Arguments Value
The signal in FAIMS data exhibits a high degree of local correlation. This function zeroes out a fraction of pixels with the lowest degree of local correlation.
1 2 | denoiseFaimsData.localCorr(FAIMSObject, neighbourhoodSizeCol = 1,
neighbourhoodSizeRow = 1, alpha = 0.05, plot = TRUE)
|
FAIMSObject |
a FAIMS object |
neighbourhoodSizeCol |
number of neighbouring columns to include in the neighbourhood |
neighbourhoodSizeRow |
number of neighbouring rows to include in the neighbourhood |
alpha |
p-value required for a pixel to be considered correlated to its neighbours |
plot |
logical - display plots with useful information? |
A FAIMS data matrix
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