inferFilteredDesign: DiscoRhythm Experimental Design

View source: R/ODAchecks.R

inferFilteredDesignR Documentation

DiscoRhythm Experimental Design

Description

Infers the experimental design from various input data

Usage

inferFilteredDesign(se)

Arguments

se

SummarizedExperiment, the main data object used by DiscoRhythm expected to contain se$ID, se$ReplicateID, se$Time sample metadata and non-null rownames. See the vignette for more details.

Details

Characteristics of the experiment sampling are gathered to determine which oscillation deteciton algorithms are suitable.

Value

list with inferred experimental design features needed to perform replicate analysis and merging in discoRepAnalysis.


matthewcarlucci/DiscoRhythm documentation built on March 24, 2022, 10:22 a.m.