prioritization.table: —————— Prioritization summary table

In matthiasheinig/QTLnetwork: Basic package to apply random walks for QTL candidate gene priorization

Description

Extract summary information from the random walk analysis

Usage

prioritization.table(prioritize, full = FALSE, locus.graphs = NULL,
  subset = NULL)

Arguments

prioritize	list of random walk analysis results generated with the network_batch.R script
full	boolean indicating whether all genes in the trans locus should be reported (TRUE) or only the best (FALSE)
locus.graphs	a list of graphNEL objects with more details on the graphs used for analysis (for full summary)
subset	list of subsets of trans genes for each locus this is useful to recycle permutation runs on maximal intervals

Value

data.frame with the best candidate gene per locus

Author(s)

Matthias Heinig <[e-mail]>

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matthiasheinig/QTLnetwork documentation built on June 29, 2021, 10:11 p.m.