pclade: Probability of a clade of size 'k' on 'n' taxa.

In maxbiostat/cladeCorrelation: Clade probabilities and correlations under uniform-on-topologies tree probability distributions;

Probability of a clade of size k on n taxa.

Description

Probability of a clade of size k on n taxa.

Usage

pclade(k, n, log = FALSE)

Arguments

k	size of clade.
n	number of taxa.
log	logical if TRUE (default is FALSE) returns log probability.

Details

Lemma 4.2 of Zhu, Degnan & Steel (2011).

Value

(log) probability of a clade of size k for n taxa.

References

Zhu, S., Degnan, J. H., & Steel, M. (2011). Clades, clans, and reciprocal monophyly under neutral evolutionary models. Theoretical population biology, 79(4), 220-227.

Examples

pclade(k = 2, n = 5)

maxbiostat/cladeCorrelation documentation built on July 28, 2023, 2:42 a.m.