Files in maxconway/fbar

An Extensible Approach to Flux Balance Analysis

.Rbuildignore

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

NEWS.md R/convenience_wrappers.R R/data.R R/deprecated.R R/fbar.R R/gene_associate.R R/gene_expression_evaluation.R R/metabolite_utilities.R R/parsing_and_conversion.R R/utilities.R README.Rmd README.md

_pkgdown.yml

cran-comments.md data-raw/ecoli_core.R data-raw/iJO1366.R data-raw/nutrient_types.R

data/ecoli_core.rda

data/iJO1366.rda

data/nutrient_types.rda

docs/404.html

docs/articles/Introduction.html

docs/articles/Introduction_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Multi-Objective_Optimization_case_study.html

docs/articles/Multi-Objective_Optimization_case_study_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/Tutorial.html

docs/articles/Tutorial_files/accessible-code-block-0.0.1/empty-anchor.js

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/jquery.sticky-kit.min.js

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/decompose_metabolites.html

docs/reference/ecoli_core.html

docs/reference/expanded_to_ROI.html

docs/reference/expanded_to_glpk.html

docs/reference/expanded_to_gurobi.html

docs/reference/expanded_to_reactiontbl.html

docs/reference/fbar.html

docs/reference/find_flux_variability_df.html

docs/reference/find_fluxes_df.html

docs/reference/gene_associate.html

docs/reference/gene_eval.html

docs/reference/get_BiGG.html

docs/reference/iJO1366.html

docs/reference/index.html

docs/reference/nutrient_types.html

docs/reference/parse_met_list.html

docs/reference/reactiontbl_to_expanded.html

docs/reference/reactiontbl_to_gurobi.html

docs/reference/recompose_metabolites.html

docs/reference/split_on_arrow.html

docs/reference/validate_expanded.html

docs/sitemap.xml

fbar.Rproj

inst/WORDLIST

inst/extdata/ecoli_core.tsv

inst/extdata/iJO1366.tsv

inst/extdata/nutrient_types.tsv

man/decompose_metabolites.Rd man/ecoli_core.Rd man/expanded_to_ROI.Rd man/expanded_to_glpk.Rd man/expanded_to_gurobi.Rd man/expanded_to_reactiontbl.Rd man/fbar.Rd man/find_flux_variability_df.Rd man/find_fluxes_df.Rd man/gene_associate.Rd man/gene_eval.Rd man/get_BiGG.Rd man/iJO1366.Rd man/nutrient_types.Rd man/parse_met_list.Rd man/reactiontbl_to_expanded.Rd man/reactiontbl_to_gurobi.Rd man/recompose_metabolites.Rd man/split_on_arrow.Rd man/validate_expanded.Rd tests/spelling.R tests/testthat.R tests/testthat/test-ROI.R tests/testthat/test-ROI_plugins.R tests/testthat/test-convenience.R tests/testthat/test-full-size.R tests/testthat/test-gene_expression_processing.R tests/testthat/test-metabolite-parsing.R tests/testthat/test-parsing_and_conversion.R tests/testthat/test-utilities.R vignettes/Introduction.Rmd vignettes/Multi-Objective_Optimization_case_study.Rmd vignettes/Tutorial.Rmd

maxconway/fbar documentation built on Sept. 8, 2020, 6:20 p.m.