meb_DimPlot: meb_DimPlot

In mayaeb/mebfunctions: R functions for NGS data QC, analysis, and visualization

meb_DimPlot

Description

Create Seurat DimPlot with consistent and attractive formatting

Usage

meb_DimPlot(
  seurat_obj,
  pt_size = 1.25,
  reduction = "umap",
  group_by = "orig.ident",
  cols = NULL,
  dims_plot = 1:2,
  split_by = NULL,
  label = F
)

Arguments

seurat_obj	Seurat object
pt_size	point size - default 1.25
group_by	metadata to group by - default "orig.ident"
cols	color palette
label	add labels to plot

Value

a ggplot object

mayaeb/mebfunctions documentation built on Sept. 4, 2022, 1:42 a.m.