Files in mchiapello/Ramf
Arbuscular Mycorrhizal colonization calculation
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
NEWS.md
R/data.R
R/functions.R
R/methods-grid.R
R/methods-trouvelot.R
R/methods.R
R/readData.R
README.md
data/grid.rda
data/trouvelot.rda
docs/apple-touch-icon-120x120.png
docs/apple-touch-icon-152x152.png
docs/apple-touch-icon-180x180.png
docs/apple-touch-icon-60x60.png
docs/apple-touch-icon-76x76.png
docs/apple-touch-icon.png
docs/articles/Ramf.html
docs/articles/Ramf_files/figure-html/plot-1.png
docs/articles/Ramf_files/figure-html/plot-10.png
docs/articles/Ramf_files/figure-html/plot-11.png
docs/articles/Ramf_files/figure-html/plot-12.png
docs/articles/Ramf_files/figure-html/plot-2.png
docs/articles/Ramf_files/figure-html/plot-3.png
docs/articles/Ramf_files/figure-html/plot-4.png
docs/articles/Ramf_files/figure-html/plot-5.png
docs/articles/Ramf_files/figure-html/plot-6.png
docs/articles/Ramf_files/figure-html/plot-7.png
docs/articles/Ramf_files/figure-html/plot-8.png
docs/articles/Ramf_files/figure-html/plot-9.png
docs/articles/Ramf_files/figure-html/plot1-1.png
docs/articles/Ramf_files/figure-html/plot2-1.png
docs/articles/Ramf_files/figure-html/plot2-2.png
docs/articles/Ramf_files/figure-html/plot2-3.png
docs/articles/Ramf_files/figure-html/plot2-4.png
docs/articles/Ramf_files/figure-html/plot2-5.png
docs/articles/Ramf_files/figure-html/plot2-6.png
docs/articles/Ramf_files/figure-html/plot2-7.png
docs/articles/Ramf_files/figure-html/plot2-8.png
docs/articles/Ramf_files/figure-html/stat.plot-1.png
docs/articles/Ramf_files/figure-html/stat.plot-2.png
docs/articles/Ramf_files/figure-html/stat.plot-3.png
docs/articles/Ramf_files/figure-html/stat.plot2-1.png
docs/articles/Ramf_files/figure-html/stat.plot3-1.png
docs/articles/Ramf_files/figure-html/stat.plot3-2.png
docs/articles/Ramf_files/figure-html/stat.plot3-3.png
docs/articles/Ramf_files/figure-html/title-1.png
docs/articles/Ramf_files/figure-html/title-2.png
docs/articles/Ramf_files/figure-html/title-3.png
docs/articles/Ramf_files/figure-html/title.position-1.png
docs/articles/Ramf_files/figure-html/title.position-2.png
docs/articles/Ramf_files/figure-html/title.position-3.png
docs/articles/Ramf_files/figure-html/title.position-4.png
docs/articles/Ramf_files/figure-html/title.position-5.png
docs/articles/dotplor_trouvelot.jpg
docs/articles/index.html
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/favicon-16x16.png
docs/favicon-32x32.png
docs/favicon.ico
docs/index.html
docs/link.svg
docs/logo.png
docs/news/index.html
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/Rplot.pdf
docs/reference/Summary_Stat.csv
docs/reference/Summary_per_Replicate.csv
docs/reference/Summary_per_Sample.csv
docs/reference/am_2anova_grid-1.png
docs/reference/am_2anova_grid-2.png
docs/reference/am_2anova_grid.html
docs/reference/am_2anova_trouvelot-1.png
docs/reference/am_2anova_trouvelot-2.png
docs/reference/am_2anova_trouvelot.html
docs/reference/am_anova_grid.html
docs/reference/am_anova_trouvelot.html
docs/reference/am_barplot-1.png
docs/reference/am_barplot-2.png
docs/reference/am_barplot.html
docs/reference/am_barplot2-1.png
docs/reference/am_barplot2-2.png
docs/reference/am_barplot2.html
docs/reference/am_boxplot-1.png
docs/reference/am_boxplot-2.png
docs/reference/am_boxplot.html
docs/reference/am_boxplot2-1.png
docs/reference/am_boxplot2-2.png
docs/reference/am_boxplot2.html
docs/reference/am_dotplot-1.png
docs/reference/am_dotplot-2.png
docs/reference/am_dotplot.html
docs/reference/am_dotplot2-1.png
docs/reference/am_dotplot2-2.png
docs/reference/am_dotplot2.html
docs/reference/am_save.html
docs/reference/am_stat.html
docs/reference/am_summary.html
docs/reference/example_grid.html
docs/reference/example_trouvelot.html
docs/reference/figures/logo.png
docs/reference/index.html
docs/reference/readData.html
inst/extdata/Ramf.png
inst/extdata/grid.csv
inst/extdata/grid_incomplete.csv
inst/extdata/logo.png
inst/extdata/trouvelot.csv
man/.Rhistory
man/am_2anova_grid.Rd
man/am_2anova_trouvelot.Rd
man/am_anova_grid.Rd
man/am_anova_trouvelot.Rd
man/am_barplot.Rd
man/am_barplot2.Rd
man/am_boxplot.Rd
man/am_boxplot2.Rd
man/am_dotplot.Rd
man/am_dotplot2.Rd
man/am_save.Rd
man/am_stat.Rd
man/am_summary.Rd
man/example_grid.Rd
man/example_trouvelot.Rd
man/figures/logo.png
man/readData.Rd
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
tests/testthat.R
tests/testthat/read_test.R
tests/testthat/test_class.R
tests/testthat/test_dim.R
tests/testthat/test_plot.R
vignettes/Ramf.R
vignettes/Ramf.Rmd
vignettes/Summary_Stat.csv
vignettes/Summary_per_Replicate.csv
vignettes/Summary_per_Sample.csv
vignettes/Trouvelot_Stat.csv
vignettes/Trouvelot_per_Replicate.csv
vignettes/Trouvelot_per_Sample.csv
vignettes/barplor_grid.pdf
vignettes/dotplor_trouvelot.jpg
vignettes/dotplor_trouvelot.pdf
