chip_atlas_promoters_f5: ChIP-Atlas FANTOM5 promoters intersection matrix
In mcjmigdal/xcoredata: data package for xcore
chip_atlas_promoters_f5 R Documentation
ChIP-Atlas FANTOM5 promoters intersection matrix
Description
An intersection matrix describing overlaps between ChIP-Atlas's ChIP-seq tracks
and promoters_f5. To find overlapping regions promoters were extended
by 500bp in both directions.
Usage
chip_atlas_promoters_f5
Format
A Matrix with 209911 rows and 13891 columns. Row names corresponds to promoters
names, column names are formatted as TranscriptionFactor_Origin_Cell_ExperimentID
(eg. PARK7_Neural_SH-SY5Y_DRX000550, MLL-AF6_Blood_ML-2_DRX001460).
Examples
chip_atlas_promoters_f5()
mcjmigdal/xcoredata documentation built on Aug. 27, 2022, 11:03 p.m.
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| chip_atlas_promoters_f5 | R Documentation |
ChIP-Atlas FANTOM5 promoters intersection matrix
Description
An intersection matrix describing overlaps between ChIP-Atlas's ChIP-seq tracks
and promoters_f5. To find overlapping regions promoters were extended
by 500bp in both directions.
Usage
chip_atlas_promoters_f5
Format
A Matrix with 209911 rows and 13891 columns. Row names corresponds to promoters
names, column names are formatted as TranscriptionFactor_Origin_Cell_ExperimentID
(eg. PARK7_Neural_SH-SY5Y_DRX000550, MLL-AF6_Blood_ML-2_DRX001460).
Examples
chip_atlas_promoters_f5()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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