sge.get.result: Returns the results for a job that has been executed in the...

Description Usage Arguments Details Value Author(s) See Also

Description

Used to retrieve stored results that were written by the worker processes.

Usage

1
2

Arguments

sge.fname

File location where the worker process results are stored

jobid

Job id of the job whose results we are returning

list

List that contains the jobid and filename

...

also passes sge.fname, jobid, and remove arguments to sge.get.result

Details

If the list version is used, then the list must have the named elements filename and jobid.

Rsge integrates with SGE by using the R functions load/store to write files to to a shared file system accessible by both the worker processes and the submission process.

Every node that runs will store its results in a unique file specified by the options sge.file.prefix and sge.ret.ext. This function excepts the results filename to be passed as an option.

sge.file.prefixuniquestring[SGE\_TASK\_ARRAY\_ID].sge.ret.ext

This funciton is used internally by sge.parApply, and should be called by the user to gather results from calls to sge.submit.

Value

Returns results from the worker processes.

Author(s)

Dan Bode [email protected]

See Also

sge.submit


mcvaneede/Rsge documentation built on May 21, 2019, 12:44 p.m.