sge.get.result: Returns the results for a job that has been executed in the...
In mcvaneede/Rsge: Interface to the SGE Queuing System

Description Usage Arguments Details Value Author(s) See Also

Used to retrieve stored results that were written by the worker processes.

1 2	sge.get.result(sge.fname, jobid) sge.list.get.result(list, ...)

`sge.fname`	File location where the worker process results are stored
`jobid`	Job id of the job whose results we are returning
`list`	List that contains the jobid and filename
`...`	also passes sge.fname, jobid, and remove arguments to sge.get.result

If the list version is used, then the list must have the named elements filename and jobid.

Rsge integrates with SGE by using the R functions load/store to write files to to a shared file system accessible by both the worker processes and the submission process.

Every node that runs will store its results in a unique file specified by the options sge.file.prefix and sge.ret.ext. This function excepts the results filename to be passed as an option.

sge.file.prefixuniquestring[SGE\_TASK\_ARRAY\_ID].sge.ret.ext

This funciton is used internally by sge.parApply, and should be called by the user to gather results from calls to sge.submit.

Returns results from the worker processes.

Dan Bode dbode@univaud.com

sge.submit

mcvaneede/Rsge documentation built on May 21, 2019, 12:44 p.m.