plot_SNlinks: Plot links between 1.0 markers
In mdavy86/polymapR: Linkage Analysis in Outcrossing Polyploids
View source: R/aiding_functions.R
Description
Make a plot with recombination frequency versus LOD score.
Usage
1
plot_SNlinks(linkage_df, LG_hom_stack, LG_number, h1, h2, ymax = NULL)
Arguments
linkage_df
A linkage data.frame.
LG_hom_stack
A data.frame as a result of bridgeHomologues
LG_number
Chromosome (LG) number.
h1
Homologue to be compared.
h2
Homologue to be compared against h1
ymax
Maximum limit of y-axis
mdavy86/polymapR documentation built on May 25, 2019, 9:35 p.m.
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View source: R/aiding_functions.R
Description
Make a plot with recombination frequency versus LOD score.
Usage
1 | plot_SNlinks(linkage_df, LG_hom_stack, LG_number, h1, h2, ymax = NULL)
|
Arguments
linkage_df |
A linkage data.frame. |
LG_hom_stack |
A |
LG_number |
Chromosome (LG) number. |
h1 |
Homologue to be compared. |
h2 |
Homologue to be compared against h1 |
ymax |
Maximum limit of y-axis |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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