segtypeInfoSummary: Summarize the segtypeInfo list
In mdavy86/polymapR: Linkage Analysis in Outcrossing Polyploids
Description
Usage
Arguments
Value
View source: R/aiding_functions.R
Description
From a list of segregation types as produced by calcSegtypeInfo
or selSegtypeInfo, produce a data frame that only lists the parental
dosage combinations for each segtype and whether these produce the
segtype under polysomic, disomic and/or mixed inheritance.
Useful to quickly look up which segtypes match a given parental dosage
combination.
Usage
1
segtypeInfoSummary(segtypeInfo)
Arguments
segtypeInfo
a list as returned by calcSegtypeInfo or selSegtypeInfo
Value
A data frame summarizing the segtypeInfo list, with columns:
segtype: the name of the segregation type (see details of
calcSegtypeInfo)
segtypenr: the sequential number of the segtype in parameter segtypeInfo
parent1, parent2: dosages of the two parents
par.poly, par.di, par.mixed: whether these parental dosages produce this
segtype under polysomic, disomic and/or mixed inheritance
mdavy86/polymapR documentation built on May 25, 2019, 9:35 p.m.
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Description Usage Arguments Value
View source: R/aiding_functions.R
Description
From a list of segregation types as produced by calcSegtypeInfo or selSegtypeInfo, produce a data frame that only lists the parental dosage combinations for each segtype and whether these produce the segtype under polysomic, disomic and/or mixed inheritance. Useful to quickly look up which segtypes match a given parental dosage combination.
Usage
1 | segtypeInfoSummary(segtypeInfo)
|
Arguments
segtypeInfo |
a list as returned by calcSegtypeInfo or selSegtypeInfo |
Value
A data frame summarizing the segtypeInfo list, with columns:
segtype: the name of the segregation type (see details of calcSegtypeInfo)
segtypenr: the sequential number of the segtype in parameter segtypeInfo
parent1, parent2: dosages of the two parents
par.poly, par.di, par.mixed: whether these parental dosages produce this segtype under polysomic, disomic and/or mixed inheritance
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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