GOtab.to.genes: The top GO term associated genes in each module
In meghapadi/ALPACA:
Description
Usage
Arguments
Value
Examples
Description
Get all the genes in the top-scoring lists which are annotated with the enriched GO terms. Only GO terms with at least 3 genes in the overlap are included.
Usage
1
GOtab.to.genes(go.result, dm.top)
Arguments
go.result
The result of the GO term analysis (list.to.go)
dm.top
The result of extracting the top genes of the differential modules (dm.top)
Value
A vector with strings representing gene lists, each element of the vector has the genes in that GO term and community pasted together with spaces in between.
Examples
1
meghapadi/ALPACA documentation built on May 20, 2019, 6:47 p.m.
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Description Usage Arguments Value Examples
Description
Get all the genes in the top-scoring lists which are annotated with the enriched GO terms. Only GO terms with at least 3 genes in the overlap are included.
Usage
1 | GOtab.to.genes(go.result, dm.top)
|
Arguments
go.result |
The result of the GO term analysis (list.to.go) |
dm.top |
The result of extracting the top genes of the differential modules (dm.top) |
Value
A vector with strings representing gene lists, each element of the vector has the genes in that GO term and community pasted together with spaces in between.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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