getflowFrame: 'CellPopulation' class accessor.

In mehrnoushmalek/flowDensity: Sequential Flow Cytometry Data Gating

Description

an accessor for 'CellPopulation' class to get its 'FlowFrame' object. This will remove all the NA values in the frame.

Usage

	getflowFrame(obj)

Arguments

obj	a 'CellPopulation' object.

Value

a 'FlowFrame' object.

Author(s)

Jafar Taghiyar <[e-mail]>

Examples

data_dir <- system.file("extdata", package = "flowDensity")
load(list.files(pattern = 'sampleFCS_1', data_dir, full = TRUE))
lymph <- flowDensity(obj=f, channels=c('FSC-A', 'SSC-A'),
                     position=c(TRUE, FALSE), upper= c(NA, TRUE), debris.gate=c(TRUE, FALSE))
f.lymph <- getflowFrame(lymph)

mehrnoushmalek/flowDensity documentation built on May 2, 2020, 6:33 a.m.