getflowFrame: 'CellPopulation' class accessor.

In mehrnoushmalek/flowDensity: Sequential Flow Cytometry Data Gating

'CellPopulation' class accessor.

Description

an accessor for 'CellPopulation' class to get its 'FlowFrame' object. This will remove all the NA values in the frame.

Usage

	getflowFrame(obj)

Arguments

obj	a 'CellPopulation' object.

Value

a 'FlowFrame' object.

Author(s)

Jafar Taghiyar <[e-mail]>

Examples

data_dir <- system.file("extdata", package = "flowDensity")
load(list.files(pattern = 'sampleFCS_1', data_dir, full = TRUE))
lymph <- flowDensity(obj=f, channels=c('FSC-A', 'SSC-A'),
                     position=c(TRUE, FALSE), upper= c(NA, TRUE), debris.gate=c(TRUE, FALSE))
f.lymph <- getflowFrame(lymph)

mehrnoushmalek/flowDensity documentation built on May 1, 2022, 12:50 p.m.