pathway_summary: print pathways generates a summary plot for pathways and...

Description Usage Arguments Value

View source: R/mdp.R

Description

print pathways generates a summary plot for pathways and sample score plot of best gene set

Usage

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pathway_summary(sample_results, path, file_name, control_samples,
  control_lab)

Arguments

sample_results

list of sample scores for each geneset

path

directory to save images

file_name

name of saved imaged

control_samples

list of control sample names

control_lab

label that specifies control class

Value

data frame of signal to noise ratio of control vc test sample scores for each pathway


melissalever/mdp documentation built on Aug. 8, 2021, 10:45 p.m.