pathway_summary: print pathways generates a summary plot for pathways and...
In melissalever/mdp: Molecular Degree of Perturbation calculates scores for transcriptome data samples based on their perturbation from controls

print pathways generates a summary plot for pathways and sample score plot of best gene set

1 2	pathway_summary(sample_results, path, file_name, control_samples, control_lab)

`sample_results`	list of sample scores for each geneset
`path`	directory to save images
`file_name`	name of saved imaged
`control_samples`	list of control sample names
`control_lab`	label that specifies control class

data frame of signal to noise ratio of control vc test sample scores for each pathway

melissalever/mdp documentation built on Aug. 8, 2021, 10:45 p.m.

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