Man pages for melmasri/HPprediction
Host-parasite prediction based on phylogeny
| gmpd | Host-Parasite interaction data from the Global Mammal... |
| lof | A function to left order a matrix based on first occurrence... |
| mammal_supertree | Fritz et al. (2009) mammal supertree |
| network_clean | A function to clean the network and tree: |
| network_est | A function to run an MCMC sampler based on the Iterative... |
| plot_degree | A function to plot degree distributions |
| plot_Z | A function to plot a bipartite interaction matrix |
| rocCurves | A function to calculate and plot ROC curves |
| sample_parameter | A function to sample the estimated parameters and construct... |
| topPairs | A function to list the top predicted interactions from a... |
