plot_Z: A function to plot a bipartite interaction matrix

In melmasri/HPprediction: Host-parasite prediction based on phylogeny

Description

This function generates a raster plot of the binary interaction matrix 'Z' using the 'image' function in the 'graphics' package.

Usage

plot_Z(Z, xlab, ylab, tickMarks = 100, ...)

Arguments

Z	bipartite interaction matrix
xlab	labels for the x axis (default is 'parasites')
ylab	labels for the y axis (default is 'hosts')
...	Additional parameters that control graphing parameters

Examples

# Simluate a Z matrix and plot it
## Not run: 
Z <- matrix(rbinom(50*200, 1, 0.01), nrow=50, ncol=200)
Z <- Z[,colSums(Z)>0]
plot_Z(tree)

## End(Not run)

melmasri/HPprediction documentation built on May 2, 2020, 11:09 a.m.