motifgeneor: Find over-represented motifs in a foreground list using...
In mengchen18/PTMotif: Detect PTM motifs
Description
Usage
Arguments
Author(s)
Description
Find over-represented motifs in a foreground list using hypergeometric test
Usage
1
motifgeneor(motif, fg.genes, fg.genes.motif, bg.seqs, bg.genes)
Arguments
motif
a motif
fg.genes
unique foreground genes
fg.genes.motif
unique foreground genes containing the motif
bg.seqs
the background sequences
bg.genes
a character vector of genes names of the bg.seqs, it
should have the same length as bg.seqs
Author(s)
Chen Meng
mengchen18/PTMotif documentation built on May 29, 2019, 6:53 p.m.
R Package Documentation
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Description Usage Arguments Author(s)
Description
Find over-represented motifs in a foreground list using hypergeometric test
Usage
1 | motifgeneor(motif, fg.genes, fg.genes.motif, bg.seqs, bg.genes)
|
Arguments
motif |
a motif |
fg.genes |
unique foreground genes |
fg.genes.motif |
unique foreground genes containing the motif |
bg.seqs |
the background sequences |
bg.genes |
a character vector of genes names of the bg.seqs, it
should have the same length as |
Author(s)
Chen Meng
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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