aips.models: All the AIPS models.

Description Usage Details Value Author(s) See Also Examples

Description

This is the data object that contains all the AIPS models. It contains the naive bayes classifier using the selected pairs of genes for all the trained models presented in Paquet et al.

Usage

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Details

This is the data object that contains all the AIPS models.

Value

all.pairs

The rules used in the model definition form EntrezID gene A < EntrezID gene B

k

The selected number of optimal rules.

one.vs.all.tsp

The Naive bayes classifier used in combination with the all.pairs rules

selected.pairs.list

The list of rules sorted from the best discriminating rule to the least discriminating rules subdivided by assignments.

Author(s)

Eric R. Paquet (eric.r.paquet@gmail.com)

See Also

apply.AIPS, mcgill.gq, naiveBayes

Examples

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## Load a sample of the McGill dataset used in the paper
data(aips.models)

## list the number of models
length(aips.models)

## list the model
aips.models[[1]]$model$model

meoyo/AIPS documentation built on May 22, 2019, 6:51 p.m.