mcgill.gq: Sample of a breast cancer gene expression dataset generated...
In meoyo/AIPS: AIPS : Absolute Inference of Patient Signatures

Description Usage Details Value Author(s) See Also Examples

This is a breast cancer gene expression dataset generated at McGill University using the Affymetrix Gene ST platform. This is the validation dataset used in the A-PAM50 paper and in use in the examples of AIPS.

mcgill.gq

A sample of a breast cancer gene expression dataset currently generated at McGill University on the Affymetrix gene ST platform.

`D`	A matrix of gene expression values, rows are genes and columns are samples
`EntrezID`	A vector of Entrez ids corresponding to genes (rows) of D

Eric R. Paquet (eric.r.paquet@gmail.com)

aips.models, apply.AIPS

## Load a sample of the McGill dataset used in the paper
data(mcgill.gq)

## Dimensions of the gene expression matrix 
dim(mcgill.gq$D)

## Number of EntrezID
length(mcgill.gq$EntrezID)