| Global functions | |
|---|---|
| .findExecutable | Source code |
| box | Man page |
| boxshade | Man page Source code |
| boxshade_help | Man page Source code |
| c2s | Man page Source code |
| clustal | Man page Source code |
| clustal_help | Man page Source code |
| clustal_profile | Source code |
| dist | Man page |
| distAlignment | Man page Source code |
| distApe | Man page Source code |
| distCV | Man page Source code |
| distEdit | Man page Source code |
| distFFP | Man page Source code |
| distKMer | Man page Source code |
| distNSV | Man page Source code |
| distSimRank | Man page Source code |
| kalign | Man page Source code |
| kalign_help | Man page Source code |
| mafft | Man page Source code |
| mafft_help | Man page Source code |
| muscle | Man page Source code |
| muscle_help | Man page Source code |
| mutations | Man page Source code |
| plot | Man page |
| plot.DNAMultipleAlignment | Man page Source code |
| plot.DNAStringSet | Man page Source code |
| plot.RNAMultipleAlignment | Man page Source code |
| plot.RNAStringSet | Man page Source code |
| random_sequences | Man page Source code |
| s2c | Man page Source code |
| simRank | Man page Source code |
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