Files in mi-erasmusmc/EmcDementiaPredictionTable1

A Skeleton for Prediction Development Studies that use the PatientLevelPrediction Framework

.Rbuildignore

.Rprofile

.gitignore

DESCRIPTION

EmcDementiaPredictionTable1.Rproj

HydraConfig.json

NAMESPACE

NEWS.md R/AgeCovariateCode.R R/CohortCovariateCode.R R/CreateAllCohorts.R R/CreateCohorts.R R/EmcDementiaPredictionTable1.R R/Helpers.R R/Main.R R/MeasurementCohortCovariateCode.R R/MeasurementCovariateCode.R R/PackageResults.R R/SubmitResults.R R/createDocument.R R/createPlpProtocol.R R/createValidationPackage.R R/populateShinyApp.R R/readJson.R STUDY-PACKAGE-BUILD.md STUDY-PACKAGE-EXECUTE.md STUDY-PACKAGE-SETUP-NORENV.md STUDY-PACKAGE-SETUP.md STUDY-PACKAGE-SHARE.md

_pkgdown.yml

docs/404.html

docs/articles/AddingCohortCovariates.html

docs/articles/UsingSkeletonPackage.html

docs/articles/index.html

docs/authors.html

docs/bootstrap-toc.css

docs/bootstrap-toc.js

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/news/index.html

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/readme.html

docs/reference/EmcDementiaPredictionTable1.html

docs/reference/createCohorts.html

docs/reference/createJournalDocument.html

docs/reference/createMultiPlpReport.html

docs/reference/createPlpProtocol.html

docs/reference/execute.html

docs/reference/getCohortCovariateData.html

docs/reference/index.html

docs/reference/packageResults.html

docs/reference/populateShinyApp.html

docs/reference/submitResults.html

extras/CodeToRun.R extras/CreatePredictionAnalysisDetails.R extras/PackageMaintenance.R extras/PopulateCustomCovariates.R extras/createJSON/Table1PredSkelJson.R extras/createPredSkelJson.R extras/examplePredSkelJson.R extras/packageDeps.R extras/populateMultipleShiny.R

inst/cohorts/COPD.json

inst/cohorts/COVID_ID134_V1_Persons_hospitalized_with_COVID19.json

inst/cohorts/COVID_ID164_V1_Death.json

inst/cohorts/Cancer.json

inst/cohorts/Depression.json

inst/cohorts/Diabetes.json

inst/cohorts/Heart_disease.json

inst/cohorts/Hyperlipidemia.json

inst/cohorts/Hypertension.json

inst/cohorts/Ischemic_stroke.json

inst/cohorts/Kidney_disease.json

inst/cohorts/Outcome.json

inst/cohorts/Target.json

inst/doc/AddingCohortCovariates.pdf inst/doc/CreatingStudyPackageInR.pdf inst/doc/UsingSkeletonPackage.pdf

inst/settings/CohortsToCreate.csv

inst/settings/predictionAnalysisList.json

inst/sql/sql_server/COPD.sql

inst/sql/sql_server/COVID_ID134_V1_Persons_hospitalized_with_COVID19.sql

inst/sql/sql_server/COVID_ID164_V1_Death.sql

inst/sql/sql_server/Cancer.sql

inst/sql/sql_server/CreateCohortTable.sql

inst/sql/sql_server/Depression.sql

inst/sql/sql_server/Diabetes.sql

inst/sql/sql_server/GetCounts.sql

inst/sql/sql_server/Heart_disease.sql

inst/sql/sql_server/Hyperlipidemia.sql

inst/sql/sql_server/Hypertension.sql

inst/sql/sql_server/Ischemic_stroke.sql

inst/sql/sql_server/Kidney_disease.sql

inst/sql/sql_server/Outcome.sql

inst/sql/sql_server/Target.sql

man/EmcDementiaPredictionTable1.Rd man/createCohorts.Rd man/createJournalDocument.Rd man/createMultiPlpReport.Rd man/createPlpProtocol.Rd man/execute.Rd man/getAgeCovariateData.Rd man/getCohortCovariateData.Rd man/getMeasurementCohortCovariateData.Rd man/getMeasurementCovariateData.Rd man/packageResults.Rd man/populateShinyApp.Rd man/submitResults.Rd readme.md readmeSharing.md tests/testthat/test-CohortCovariateCode.R tests/testthat/test-createDocument.R vignettes/AddingCohortCovariates.Rmd vignettes/CreatingStudyPackageInR.Rmd

vignettes/Figure1.png

vignettes/UsingSkeletonPackage.Rmd

mi-erasmusmc/EmcDementiaPredictionTable1 documentation built on Dec. 21, 2021, 5:55 p.m.