edgerTest: EdgeR based test for differential expression analysis

In mi2-warsaw/directRNAExplorer: Package directRNAExplorer is an R package for dealing with the RNA sequencing data.

Description

Function test_edger computes the statistics for quasi-likelihood F-tests or likelihood ratio tests.

Usage

edgerTest(countsData, condition, type = "qlf", ...)

Arguments

countsData	Data frame containing counts for each
condition	Vector of conditions. In our data the type of mutation
type	Type of test "lrt" for likelihood ratio tests, "qlf" for quasi-likelihood F-tests.
...	Other arguments.

mi2-warsaw/directRNAExplorer documentation built on May 16, 2019, 8:13 p.m.