get_fa_shorthand: Generation of different shorthand notation level This...

In michaelwitting/lipidomicsUtils: Utility functions for lipidomics

Description

Generation of different shorthand notation level

This function simplifies a given shorthand notation to a lower level notation, e.g. CoA(18:2(9Z,12Z)) to CoA(18:2). Supported modifications are currently hydroxy groups (OH), hydroperoxy groups (OOH), keto groups (O) and amino groups (NH2).

Usage

get_fa_shorthand(x, level = c("structural", "molecular", "species"))

Arguments

x	Shorthand notation of a fatty acyl lipid, e.g. CoA(18:2(9Z,12Z))
level	Either structural, molecular or species for the respective levels according to SwissLipids hierachy

Author(s)

Michael Witting, [e-mail]

See Also

get_fa_biggid

Examples

library(lipidomicsUtils)
get_fa_shorthand("CoA(18:2(9Z,12Z))")

michaelwitting/lipidomicsUtils documentation built on Nov. 10, 2019, 1:17 a.m.