bp2.find: Find bp2 model objects by slot values
In microbiome/biopax2: BioPAX level 2 S4 object model
Description
Usage
Arguments
Value
Author(s)
Examples
Description
Find bp2 model objects that have particular value in particular slot. The slot must exists in the object.
Usage
1
bp2.find(objs, slotName, slotValue)
Arguments
objs
List of objects or vector of object ids to search
slotName
The slot to search
slotValue
The value the slot must contain
Value
Subset of objs that match the condition.
Author(s)
Ossi Koivistoinen
Examples
1
2
controls <- bp2.get.instances.of(my.bp2@all.objects, "bp2.control")
activations <- bp2.find(controls, "controlType", "\"ACTIVATION^^<http://www.w3.org/2001/XMLSchema#string>\"")
microbiome/biopax2 documentation built on May 22, 2019, 9:56 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) Examples
Description
Find bp2 model objects that have particular value in particular slot. The slot must exists in the object.
Usage
1 | bp2.find(objs, slotName, slotValue)
|
Arguments
objs |
List of objects or vector of object ids to search |
slotName |
The slot to search |
slotValue |
The value the slot must contain |
Value
Subset of objs that match the condition.
Author(s)
Ossi Koivistoinen
Examples
1 2 | controls <- bp2.get.instances.of(my.bp2@all.objects, "bp2.control")
activations <- bp2.find(controls, "controlType", "\"ACTIVATION^^<http://www.w3.org/2001/XMLSchema#string>\"")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.