temporalMicrobiome20: Gut Microbiome Profiling 20 Belgian Women
In microbiome/miaTime: Microbiome Time Series Analysis
temporalMicrobiome20 R Documentation
Gut Microbiome Profiling 20 Belgian Women
Description
This time-series data set contains absolute temporal variation
for most major gut genera, as well as diversity indicators for both
relative and quantitative abundance profiles of healthy women living in an
industrialized country.
Usage
data(temporalMicrobiome20)
Format
The data set in
TreeSummarizedExperiment
format.
Details
The data is available also on
https://www.nature.com/articles/s41467-021-27098-7#Sec43
The data contains 713 fecal samples from 20 Belgian women collected
over six weeks.
The current implementation in miaTime provides this as
TreeSummarizedExperiment
object.
Value
Loads the data set in R.
Author(s)
Doris Vandeputte
References
Vandeputte, D., De Commer, L., Tito, R.Y. et al. Temporal variability
in quantitative human gut microbiome profiles and implications for clinical
research.
Nat Commun 12, 6740 (2021). https://doi.org/10.1038/s41467-021-27098-7
microbiome/miaTime documentation built on May 7, 2023, 2:06 p.m.
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| temporalMicrobiome20 | R Documentation |
Gut Microbiome Profiling 20 Belgian Women
Description
This time-series data set contains absolute temporal variation for most major gut genera, as well as diversity indicators for both relative and quantitative abundance profiles of healthy women living in an industrialized country.
Usage
data(temporalMicrobiome20)
Format
The data set in
TreeSummarizedExperiment
format.
Details
The data is available also on
https://www.nature.com/articles/s41467-021-27098-7#Sec43
The data contains 713 fecal samples from 20 Belgian women collected
over six weeks.
The current implementation in miaTime provides this as
TreeSummarizedExperiment
object.
Value
Loads the data set in R.
Author(s)
Doris Vandeputte
References
Vandeputte, D., De Commer, L., Tito, R.Y. et al. Temporal variability in quantitative human gut microbiome profiles and implications for clinical research. Nat Commun 12, 6740 (2021). https://doi.org/10.1038/s41467-021-27098-7
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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