emp_human: emp_human
In microsud/jeevanuDB: jeevanuDB: Example data sets for microbiome R pkg
Description
Usage
Format
Value
Author(s)
Source
References
Description
The emp_human data set contains high-through taxonomic profiling data from
160 samples which is a small subet from the Earth Microbiome Project. 30 feces, 23 mucus,
56 saliva and 51 sebum samples with ASV-level counts
as would be expected for denoising algorithms.
#' NOTE: These are only test datasets.
Usage
1
Format
phyloseq object
Value
Loads the data set in R.
Author(s)
Sudarshan Shetty sudarshanshetty9@gmail.com
Source
https://www.nature.com/articles/nature24621
References
Thompson LR et al. (2017) A communal catalogue reveals Earth’s multiscale microbial diversity
https://www.nature.com/articles/nature24621
microsud/jeevanuDB documentation built on June 13, 2020, 12:24 a.m.
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Description Usage Format Value Author(s) Source References
Description
The emp_human data set contains high-through taxonomic profiling data from 160 samples which is a small subet from the Earth Microbiome Project. 30 feces, 23 mucus, 56 saliva and 51 sebum samples with ASV-level counts as would be expected for denoising algorithms. #' NOTE: These are only test datasets.
Usage
1 |
Format
phyloseq object
Value
Loads the data set in R.
Author(s)
Sudarshan Shetty sudarshanshetty9@gmail.com
Source
https://www.nature.com/articles/nature24621
References
Thompson LR et al. (2017) A communal catalogue reveals Earth’s multiscale microbial diversity https://www.nature.com/articles/nature24621
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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