Calculate the overlap matrix between two piles of bimodules.
OL_matrix(com1, com2 = com1, wt.x = 0.5, wt.y = 1 - wt.x)
The piles of bimodules to compare
The weight to assign X and Y sides while calculating overalps.
a c(length(com1), length(com2)) dim matrix whose ijth entry measures the P(com2[j]|com1[i]) weighted with wt.x and wt.y.
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