Man pages for mikelove/tximeta
Transcript Quantification Import with Automatic Metadata
| addCDS | Add CDS to rowRanges of a transcript-level... |
| addExons | Add exons to rowRanges of a transcript-level... |
| addIds | Add IDs to rowRanges of a SummarizedExperiment |
| getTximetaBFC | Get or set the directory of the BiocFileCache used by tximeta |
| linkedTxome | Make and load linked transcriptomes ("linkedTxome") |
| makeDGEList | Make a DGEList from tximeta output |
| retrieveCDNA | Retrieve the cDNA transcript sequence for a... |
| retrieveDb | Retrieve the TxDb or EnsDb associated with a... |
| splitSE | Split SummarizedExperiment by gene categories |
| summarizeToGene | Summarize estimated quantitites to gene-level |
| tximeta | Import transcript quantification with metadata |
| tximeta-package | Import transcript quantification with metadata |
