xydist: Distance or dissimilarity between relative abundance vectors...
In mikemc/metacal: Bias estimation and calibration for metagenomics experiments
Description
Distance or dissimilarity between relative abundance vectors x and y
Usage
1
Arguments
method
Distance/dissimilarity measure.
trim
Should x and y be reduced to their common positive elements
before computing the Aitchison distance (otherwise, the distance will be
Inf).
method == "aitchison" -> Aitchison distance
method == "bray" -> Bray-Curtis dissimilarity between x and y. Note,
converts x and y to proportions before computing.
mikemc/metacal documentation built on Feb. 20, 2022, 1:46 a.m.
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Description
Distance or dissimilarity between relative abundance vectors x and y
Usage
1 |
Arguments
method |
Distance/dissimilarity measure. |
trim |
Should x and y be reduced to their common positive elements before computing the Aitchison distance (otherwise, the distance will be Inf). method == "aitchison" -> Aitchison distance method == "bray" -> Bray-Curtis dissimilarity between x and y. Note, converts x and y to proportions before computing. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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