milescsmith/ReductionWrappers: Wrapper exposing several Python dimensional reduction tools

An R wrapper connecting Python dimensionality reduction and clustering tools, including openTSNE, opt-SNE, UMAP, PAGA, PHATE, and Phenograph, to R single cell data objects, such as those from Seurat 2/3 or scater.

Getting started

Package details

Maintainer
LicenseBSD_3_clause + file LICENSE
Version2.5.4
URL https://github.com/milescsmith/ReductionWrappers
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("milescsmith/ReductionWrappers")
milescsmith/ReductionWrappers documentation built on March 25, 2023, 11:58 a.m.