correctJasparTransfac: Converts TRANSFAC file to adjusted txt file for package...
In minhanho/MotifFunc: Functionality Visualization for Motifs
Description
Usage
Arguments
Examples
View source: R/helperFunctions.R
Description
A function that Removes extraneous lines of TRANSFAC files for usable txt
format for package functions
Usage
1
correctJasparTransfac(PWMfile, newFilePath)
Arguments
PWMfile
A string indicating the path to the downloaded TRANSFAC file
newFilePath
A string indicating the desired path to the adjusted txt
PCM file
Examples
1
2
PWMfile <- system.file("extdata", "MA0007.1.transfac", package = "MotifFunc")
correctJasparTransfac(PWMfile, "new0007.txt")
minhanho/MotifFunc documentation built on Dec. 8, 2019, 1:46 p.m.
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Description Usage Arguments Examples
View source: R/helperFunctions.R
Description
A function that Removes extraneous lines of TRANSFAC files for usable txt format for package functions
Usage
1 | correctJasparTransfac(PWMfile, newFilePath)
|
Arguments
PWMfile |
A string indicating the path to the downloaded TRANSFAC file |
newFilePath |
A string indicating the desired path to the adjusted txt PCM file |
Examples
1 2 | PWMfile <- system.file("extdata", "MA0007.1.transfac", package = "MotifFunc")
correctJasparTransfac(PWMfile, "new0007.txt")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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