Description Usage Arguments Value See Also Examples
View source: R/cbk.plot.spider.R
Read CASTEML dataframe and create spider diagram. This function does not save the created diagram. You should prepare a canvas in advance.
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| pmlfile_or_stone | A CASTEML file that exits locally or stone-ID (or pmlame). | 
| opts | List of further options for plot.  See
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| tableunit | Unit to toss to cbk.read.casteml. | 
| property | Property to align x-axis to pass to  | 
| reference | Reference of element abundance | 
| verbose | Output debug info (default: FALSE). | 
| pch | Array of symbol (default: NULL) | 
| col | Array of color (default: NULL) | 
A pmlame used to plot the diagram.
https://github.com/misasa/casteml
| 1 2 3 4 5 6 7 8 9 | pmlfile <- cbk.path("20081202172326.hkitagawa.pml")
message(sprintf("The pmlfile is located at |%s|.",pmlfile))
pmlame  <- cbk.read.casteml(pmlfile,tableunit="none",category=NULL)
cbk.plot.spider(pmlame)
pmlfile <- cbk.path("20160921173604-511857.pml")
message(sprintf("The pmlfile is located at |%s|.",pmlfile))
pmlame  <- cbk.read.casteml(pmlfile,tableunit="none",category=NULL)
cbk.plot.spider(pmlame)
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