Man pages for mjdufort/TCRtools
Helper functions for analyzing TCR sequence data from single-cell RNA-seq

match_TCR_chainsMatch the TCR junctions and (optionally) V and J genes...
plot_TCR_circosMake a circos plot of single cells, showing links between...
read_BLAST_TCR_align_hitsRead the alignment output hit table .txt file from a TCR...
tabulate_shared_TCR_chainsTabulate the shared TCRs chains in pairs of single-cell...
write_TCR_junction_fastaWrite out TCR junction sequences to a FASTA file for BLAST...
mjdufort/TCRtools documentation built on July 10, 2019, 12:13 p.m.