PeptideModificationsModule: PeptideModificationsModule

In mjhelf/METABOseek: Metaboseek platform

PeptideModificationsModule

Description

This module allows setting fixed and variable peptide modifications to be applied in peptide-related calculations (fragment annotation and peptide mass calculations)

Usage

PeptideModificationsModule(input, output, session, values)

PeptideModificationsModuleUI(id)

Arguments

input	arguments necessary for use with callModule()
output	arguments necessary for use with callModule()
session	arguments necessary for use with callModule()
values	a reactiveValues object that in effect gives read and write access to external objects
id	id to be used to define a namespace via NS() (must match id in callModule for the server Module)

Details

Does not return anything, but

initiates

values$GlobalOpts$Peptides.variableMods, values$GlobalOpts$Peptides.fixedMods

modifies

values$GlobalOpts$Peptides.variableMods, values$GlobalOpts$Peptides.fixedMods

reads

values$GlobalOpts$Peptides.variableMods, values$GlobalOpts$Peptides.fixedMods

Value

If the server module for this Module returns something, it is described in Details.

Functions

• PeptideModificationsModule: server logic for PeptideModificationsModule

• PeptideModificationsModuleUI: UI elements for PeptideModificationsModule

See Also

values for a description of the values object

mjhelf/METABOseek documentation built on April 27, 2022, 5:13 p.m.