makeRTlist2: makeRTlist2

In mjhelf/METABOseek: Metaboseek platform

makeRTlist2

Description

find and then merge peaks, given a set of mz values in a dataframe and a set of xcmsRaw objects. Wrapper for getpeaks2().

Usage

makeRTlist2(df, rawdata, ppm = 5, retainColumns = NULL, ...)

Arguments

df	a data.frame that contains a mz column with mz values of interest
rawdata	a list of xcmsRaw objects
ppm	ppm tolerance for EIC construction
retainColumns	keep and copy these columns from the original df when making the result data.frame
...	arguments passed to getpeaks2()

Value

a data.frame like getpeaks2(), that will also retain the mz column of the input df, and optionally additional as defined in retainColumns.

mjhelf/METABOseek documentation built on April 27, 2022, 5:13 p.m.