testlib <- file.path(tempdir(), "testlib")
test_that("BiocManager", {
unlink(testlib, recursive = TRUE)
pkgs <- "BiocGenerics"
suppressWarnings({
install(
pkgs = pkgs,
lib = testlib,
dependencies = FALSE,
reinstall = TRUE
)
})
expect_true(all(
pkgs %in% list.dirs(
path = testlib,
full.names = FALSE,
recursive = FALSE
)
))
expect_message(
object = install(
pkgs = pkgs,
lib = testlib,
reinstall = FALSE
),
regexp = "is installed"
)
uninstall(
pkgs = pkgs,
lib = testlib
)
expect_false(all(
pkgs %in% list.dirs(
path = testlib,
full.names = FALSE,
recursive = FALSE
)
))
unlink(testlib, recursive = TRUE)
})
test_that("Acid Genomics repo", {
unlink(testlib, recursive = TRUE)
pkgs <- "goalie"
suppressWarnings({
install(
pkgs = pkgs,
lib = testlib,
dependencies = FALSE,
reinstall = TRUE
)
})
expect_true(all(
pkgs %in% list.dirs(
path = testlib,
full.names = FALSE,
recursive = FALSE
)
))
expect_message(
object = install(
pkgs = pkgs,
lib = testlib,
reinstall = FALSE
),
regexp = "is installed"
)
unlink(testlib, recursive = TRUE)
})
test_that("Git repo", {
unlink(testlib, recursive = TRUE)
pkgNames <- "goalie"
pkgs <- paste0("https://github.com/acidgenomics/r-", pkgNames, ".git")
install(
pkgs = pkgs,
lib = testlib,
dependencies = FALSE,
reinstall = TRUE
)
expect_true(all(
pkgNames %in% list.dirs(
path = testlib,
full.names = FALSE,
recursive = FALSE
)
))
expect_message(
object = install(
pkgs = pkgs,
lib = testlib,
reinstall = FALSE
),
regexp = "is installed"
)
unlink(testlib, recursive = TRUE)
})
test_that("GitHub", {
unlink(testlib, recursive = TRUE)
pkgNames <- "goalie"
pkgs <- paste0("acidgenomics/r-", pkgNames)
install(
pkgs = pkgs,
lib = testlib,
dependencies = FALSE,
reinstall = TRUE
)
expect_true(all(
pkgNames %in% list.dirs(
path = testlib,
full.names = FALSE,
recursive = FALSE
)
))
expect_message(
object = install(
pkgs = pkgs,
lib = testlib,
reinstall = FALSE
),
regexp = "is installed"
)
unlink(testlib, recursive = TRUE)
})
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