doJobCollection: Execute Jobs of a JobCollection

In mllg/batchtools: Tools for Computation on Batch Systems

Execute Jobs of a JobCollection

Description

Executes every job in a JobCollection. This function is intended to be called on the slave.

Usage

doJobCollection(jc, output = NULL)

Arguments

jc	[JobCollection] Either an object of class “JobCollection” as returned by makeJobCollection or a string with the path to file containing a “JobCollection” as RDS file (as stored by submitJobs).
output	[character(1)] Path to a file to write the output to. Defaults to NULL which means that output is written to the active sink. Do not set this if your scheduler redirects output to a log file.

Value

[character(1)]: Hash of the JobCollection executed.

See Also

Other JobCollection: makeJobCollection()

Examples

tmp = makeRegistry(file.dir = NA, make.default = FALSE)
batchMap(identity, 1:2, reg = tmp)
jc = makeJobCollection(1:2, reg = tmp)
doJobCollection(jc)

mllg/batchtools documentation built on April 21, 2023, 11:49 a.m.